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Found 9 results
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Soil Microbiology
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2015
Hultman J
,
Waldrop MP
,
Mackelprang R
,
David MM
,
McFarland J
,
Blazewicz SJ
,
Harden J
,
Turetsky MR
,
A McGuire D
,
Shah MB
et al.
. 2015.
Multi-omics of permafrost, active layer and thermokarst bog soil microbiomes.
.
Nature. 521(7551):208-12.
2014
Prestat E
,
David MM
,
Hultman J
,
Taş N
,
Lamendella R
,
Dvornik J
,
Mackelprang R
,
Myrold DD
,
Jumpponen A
,
Tringe SG
et al.
. 2014.
FOAM (Functional Ontology Assignments for Metagenomes): a Hidden Markov Model (HMM) database with environmental focus.
.
Nucleic Acids Res. 42(19):e145.
2013
Nicora CD
,
Anderson BJ
,
Callister SJ
,
Norbeck AD
,
Purvine SO
,
Jansson JK
,
Mason OU
,
David MM
,
Jurelevicius D
,
Smith RD
et al.
. 2013.
Amino acid treatment enhances protein recovery from sediment and soils for metaproteomic studies.
.
Proteomics. 13(18-19):2776-85.
Bravo D
,
Martin G
,
David MM
,
Cailleau G
,
Verrecchia E
,
Junier P
. 2013.
Identification of active oxalotrophic bacteria by Bromodeoxyuridine DNA labeling in a microcosm soil experiments.
.
FEMS Microbiol Lett. 348(2):103-11.
2012
Bælum J
,
Prestat E
,
David MM
,
Strobel BW
,
Jacobsen CS
. 2012.
Modeling of phenoxy acid herbicide mineralization and growth of microbial degraders in 15 soils monitored by quantitative real-time PCR of the functional tfdA gene.
.
Appl Environ Microbiol. 78(15):5305-12.
2011
Mackelprang R
,
Waldrop MP
,
DeAngelis KM
,
David MM
,
Chavarria KL
,
Blazewicz SJ
,
Rubin EM
,
Jansson JK
. 2011.
Metagenomic analysis of a permafrost microbial community reveals a rapid response to thaw.
.
Nature. 480(7377):368-71.
2010
Nemir A
,
David MM
,
Perrussel R
,
Sapkota A
,
Simonet P
,
Monier J-M
,
Vogel TM
. 2010.
Comparative phylogenetic microarray analysis of microbial communities in TCE-contaminated soils.
.
Chemosphere. 80(5):600-7.
2009
Demanèche S
,
Philippot L
,
David MM
,
Navarro E
,
Vogel TM
,
Simonet P
. 2009.
Characterization of denitrification gene clusters of soil bacteria via a metagenomic approach.
.
Appl Environ Microbiol. 75(2):534-7.
Demanèche S
,
David MM
,
Navarro E
,
Simonet P
,
Vogel TM
. 2009.
Evaluation of functional gene enrichment in a soil metagenomic clone library.
.
J Microbiol Methods. 76(1):105-7.